rs2426682 chr20:56788401 T>A
- Sequence
acagaaggtgtctgcatgccagcc[T/A]tattctgagttctgaggacaccgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) T47D (invasive ductal carcinoma) breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN ERR1_HUMAN FOXA1_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.55 | -0.00 | 3.42 | n/a | No Hit | |||
| ERR1_HUMAN | 2.30 | -3.14 | 3.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.06 | 0.11 | 2.35 | n/a | No Hit | |||
| CREB1_HUMAN | 2.32 | -0.23 | 2.33 | n/a | No Hit | |||
| PRGR_HUMAN | 1.61 | -0.94 | 1.67 | n/a | No Hit |
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