ADASTRA v1.6.10
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rs242803
chr20:60062644
C
>
G
Sequence
cagtgccgaagtgctgcctggcct[C/G]tcaggaaccagctgcagctgggat
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CLOCK_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CLOCK_HUMAN
2.12
-0.89
0.05
0.92
3.25
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
major depressive disorder
,
total cholesterol change with statins
,
triglycerides change with statins
GTEx eQTL
Adipose_Visceral_Omentum
,
Brain_Cerebellar_Hemisphere
,
Brain_Hypothalamus
,
Heart_Atrial_Appendage
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Spleen
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)