rs2443557 chr11:134276116 T>C
- Sequence
tcgtcaccaaagcgcccgccgcgc[T/C]cgcatctgctgtgaggctgtgctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293T (embryonic kidney) HUVEC (umbilical vein endothelial cells)
- ASB for transcription factors
- LMBL2_HUMAN RING2_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| LMBL2_HUMAN | 2.43 | n/a | 2.00 | n/a | n/a | |||
| RING2_HUMAN | n/a | 1.94 | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | -1.84 | 2.18 | 2.00 | n/a | n/a |
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