rs245058 chr5:149956943 T>C
- Sequence
aaaaactatcaatgtctgagtcaa[T/C]accaataaaagtatatctggtagt
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.43 | 2.19 | 2.00 | 1.29 | Weak Concordant | |||
| HXB13_HUMAN | -1.88 | 1.95 | 2.00 | n/a | No Hit |
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Motif analysis
