rs245111 chr19:50025640 C>T
- Sequence
ccaatcggaatgcaccgtgaggta[C/T]ctctccaccaatcagaggtcacat
- ASB in cell types
- HEK293 (embryonic kidney) CD34+ hematopoietic stem cells-derived proerythroblasts fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- KMT2A_HUMAN GATA1_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | n/a | 2.02 | 1.25 | n/a | n/a | |||
| GATA1_HUMAN | -0.21 | 1.20 | 1.54 | n/a | No Hit | |||
| GABPA_HUMAN | -0.02 | 1.18 | 1.72 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood