rs245596 chr5:162683484 A>T
- Sequence
caacctctacaattagtttcgtag[A/T]gccaagaagaaagttccccttttg
- ASB in cell types
- GM12878 (female B-cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.94 | -1.46 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.65 | -1.26 | 1.33 | n/a | n/a | |||
| FOXA1_HUMAN | -0.14 | 1.08 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3