rs246141 chr16:69425688 C>T
- Sequence
ccatgttaagacataaaccatttc[C/T]atcattctaaaaagcttcctttcc
- ASB in cell types
- HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.73 | 0.15 | 1.87 |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, ldl cholesterol, parkinsons disease, rheumatoid arthritis, salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Colon_Transverse, Esophagus_Mucosa, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood