rs246173 chr16:14285979 A>G
- Sequence
gtccgtgcctgatatccaaccttc[A/G]gctatagggtggagactttttagg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HEK293T (embryonic kidney) neural cell
- ASB for transcription factors
- HDAC1_HUMAN CTBP1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | -0.59 | 1.59 | 2.00 | n/a | n/a | |||
| CTBP1_HUMAN | -1.34 | 1.93 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 1.40 | 0.99 | 1.75 | n/a | n/a |
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