rs2462838 chr17:45584357 C>T
- Sequence
cgggaagagagagcgagtgtggcc[C/T]gccaactgcaacaatgcaatctcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) HEK293 (embryonic kidney) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EP400_HUMAN HDAC1_HUMAN MNT_HUMAN RING2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP400_HUMAN | n/a | 3.18 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -3.31 | 2.32 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 0.20 | 2.36 | 2.00 | n/a | n/a | |||
| RING2_HUMAN | 1.73 | -1.01 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -1.33 | 2.28 | 2.17 | n/a | n/a |
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