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rs246388 chr5:150115832 T>C

Sequence
cgaatccggcaactgttccagctc[T/C]ggctccggctccacctggagctca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZN316_HUMAN MEIS2_HUMAN GABP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN316_HUMAN 2.13 -0.71 3.3·10-30.88 2.00 n/a n/a
MEIS2_HUMAN 2.26 n/a 5.7·10-31.00 2.00 n/a No Hit
GABP1_HUMAN 2.14 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2) triglycerides
GTEx eQTL Artery_Tibial

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