ADASTRA v1.6.10
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rs246388
chr5:150115832
T
>
C
Sequence
cgaatccggcaactgttccagctc[T/C]ggctccggctccacctggagctca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZN316_HUMAN
MEIS2_HUMAN
GABP1_HUMAN
Search SNPs nearby
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN316_HUMAN
2.13
-0.71
3.3·10
-3
0.88
2.00
n/a
n/a
MEIS2_HUMAN
2.26
n/a
5.7·10
-3
1.00
2.00
n/a
No Hit
GABP1_HUMAN
2.14
n/a
0.02
1.00
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
obesity with early age of onset (age >2)
,
triglycerides
GTEx eQTL
Artery_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2-scale
log2(Alt/Ref motif p-value)