rs246760 chr5:5580103 C>T
- Sequence
tggcttggtctggactatggtaag[C/T]ggcaagcattggctccttctcagc
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.22 | 1.85 | 2.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP amyotrophic lateral sclerosis (als), fasting insulin, hip bone mineral density (bmd), refractive error, transmission distortion