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rs246812 chr5:76304326 A>G

Sequence
gctaattagtgagtatctgaaaat[A/G]tttcaggctaaaacctcttccacc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN MTA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.04 2.05 1.003.2·10-4 1.33 n/a No Hit
IKZF2_HUMAN -2.21 2.02 1.006.3·10-3 1.33 n/a n/a
MTA2_HUMAN -1.72 1.54 1.000.04 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol serum creatinine

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