ADASTRA v1.6.10
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rs247145
chr5:14326397
C
>
T
Sequence
ctgacatttgacttaggtgctgag[C/T]gatggtagctgtttcaagtgtgca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.19
0.73
1.00
3.1·10
-3
1.56
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
infant head circumference
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)