rs2474438 chr20:3768366 C>G
- Sequence
gagacgcgtcccgggtgcctggcc[C/G]ggcctggagaagcatcagaacaaa
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) breast tumor tissue RWPE2
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.93 | -1.62 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.22 | 0.82 | 1.28 | n/a | No Hit |
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