ADASTRA v1.6.10
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adastra.autosome.org
rs2477695
chr1:2468175
A
>
G
Sequence
cccagcccctgatcgaggttggca[A/G]aggtggccctgagctgcagtcagc
ASB in cell types
HeLa S3 (cervical adenocarcinoma)
PFSK1 (primitive neuroectodermal tumor)
SK-N-SH (neuroblastoma)
ASB for transcription factors
REST_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN
2.04
-0.05
4.9·10
-9
1.00
1.77
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)