ADASTRA v1.6.10
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rs247918
chr12:45872180
C
>
T
Sequence
tgcctgctttgggtttaatgtgct[C/T]ttctttgtctagtttcctaaggta
ASB in cell types
HEK293 (embryonic kidney)
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
-0.32
0.47
0.99
0.04
1.98
K562 (myelogenous leukemia)
0.54
-0.15
0.05
0.90
2.02
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Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
college completion
,
height
,
ldl cholesterol
,
parkinsons disease
,
rheumatoid arthritis
,
years of education
GTEx eQTL
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Cells_Cultured_fibroblasts
,
Lung
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale