rs248843 chr16:11194571 T>G
- Sequence
cctgtagacctttgttcatggttt[T/G]tggggtcagtcaccctgagtgcct
- ASB in cell types
- GM12878 (female B-cells)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells) | -1.31 | 1.58 | 1.50 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, ldl cholesterol change with statins, total cholesterol change with statins, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid