rs2488769 chr1:112394335 G>A
- Sequence
tctgcttcattgtcaggcgatgag[G/A]cacttcctcattgcatacacatag
- ASB in cell types
- HEK293 (embryonic kidney) periferal blood macrophages CD14+ monocytes GM12878 (female B-cells)
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.34 | -0.31 | 1.85 | -0.36 | Weak Concordant | |||
| STAT1_HUMAN | -2.76 | 2.21 | 2.50 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
