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rs249643 chr5:142145181 C>G

Sequence
taaaattgtcattgaggctttccc[C/G]atggctttcttcaggttgacattc
ASB in cell types
RWPE2

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
RWPE2 2.50 n/a 4.0·10-31.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP waist hip ratio
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Muscle_Skeletal Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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