ADASTRA v1.6.10
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rs249851
chr12:98471193
G
>
A
Sequence
tcattatagctccaaggccagcac[G/A]gtccctaatcagaactcactgaac
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.27
1.16
1.00
2.8·10
-6
1.54
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
hip bone mineral density (bmd)
,
refractive error
,
rheumatoid arthritis
GTEx eQTL
Brain_Nucleus_accumbens_basal_ganglia
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Ovary
,
Pancreas
,
Pituitary
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)