rs2499767 chr6:33988388 A>G
- Sequence
ggaagcagcgcagccagctgacag[A/G]atcagttaacacacgaaggcctct
- ASB in cell types
- HepG2 (hepatoblastoma) T47D (invasive ductal carcinoma) SK-BR-3 (breast adenocarcinoma) breast tumor tissue
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN GATA3_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.18 | 1.61 | 2.08 | n/a | No Hit | |||
| ESR1_HUMAN | -0.36 | 1.26 | 2.06 | n/a | No Hit | |||
| GATA3_HUMAN | -3.09 | 2.26 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | -0.85 | 1.53 | 2.00 | n/a | n/a | |||
| AP2C_HUMAN | -3.06 | 2.23 | 2.00 | n/a | No Hit |
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