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rs2500340 chr1:54999070 T>C

Sequence
ggatcttgctctcccttgaagcct[T/C]gagttgcagcgatttcagtgtctt
ASB in cell types
HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) 1.00 -0.35 7.3·10-31.00 1.98
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Motif analysis

No data available

Genetic associations

GRASP autism ldl cholesterol total cholesterol
GTEx eQTL Adrenal_Gland Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia Colon_Transverse Lung Pituitary Prostate Testis

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