rs2501787 chr1:17304232 T>C
- Sequence
ataatgctgaagcaagagctaggc[T/C]atctgctgtaagaacagcactgca
- ASB in cell types
- hMADS-3 (adipose-derived stem cells)
- ASB for transcription factors
- PPARG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PPARG_HUMAN | 1.46 | -0.50 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Spleen, Thyroid, Whole_Blood