rs2507 chr15:73983335 A>G
- Sequence
cccagctcgccaggcatgcaggac[A/G]gagctggcagatgagtcagaaatc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZBT20_HUMAN ZN600_HUMAN GLIS1_HUMAN ZIC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT20_HUMAN | -2.12 | 1.92 | 1.33 | n/a | n/a | |||
| ZN600_HUMAN | -2.23 | 2.04 | 1.33 | n/a | n/a | |||
| GLIS1_HUMAN | -2.19 | 2.10 | 1.33 | n/a | n/a | |||
| ZIC2_HUMAN | -2.29 | 2.05 | 1.50 | n/a | n/a | |||
| TZAP_HUMAN | -1.91 | 2.14 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP coronary artery disease (cad), glaucoma, hdl cholesterol, height, late onset alzheimers disease
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood