rs2515272 chr11:70128515 G>A
- Sequence
cccaggggttggccatgccagctc[G/A]gcccttccaccacatggtcagaaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) epithelial cell of prostate PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN MAX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.12 | 1.87 | 1.47 | n/a | No Hit | |||
| RAD21_HUMAN | -0.43 | 1.69 | 1.39 | n/a | n/a | |||
| MAX_HUMAN | -0.20 | 1.82 | 1.42 | n/a | No Hit |
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