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rs251850 chr19:53991509 T>C

Sequence
tccccttaaaacacccgggatccc[T/C]atggcaacaggcgccgggcgacag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RFX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN -1.71 2.07 1.000.03 2.00 6.17 Concordant
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Motif analysis

RFX1_HUMAN Concordant
RFX1_HUMAN pic

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence parkinsons disease psoriasis
GTEx eQTL Colon_Transverse Muscle_Skeletal Pituitary Spleen Testis

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