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rs252781 chr5:78057183 G>A

Sequence
cggcatgaatctagttccacaatc[G/A]actgaggtttgcttcagtgaactc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.45 -0.33 1.4·10-41.00 1.47 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Colon_Transverse Lung Ovary Thyroid Whole_Blood

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