rs2532280 chr17:46167993 G>A
- Sequence
ctactaaatattttcatcagggct[G/A]cctagacgaaacctagcccaccac
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.21 | -0.24 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 1.66 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, body mass index (bmi), diastolic blood pressure (dbp), height, ldl cholesterol, lung function, forced expiratory volume in 1 second (fev1), obesity (body mass index (bmi)), systolic blood pressure (sbp), triglycerides