rs254358 chr16:65889602 G>A
- Sequence
gtttttcctgccccagactaaggg[G/A]ctgtatttactttaaactttcctc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GRHL2_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.29 | 2.50 | 1.75 | n/a | No Hit | |||
| GRHL2_HUMAN | -0.38 | 1.54 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | -3.82 | 2.06 | 2.50 | n/a | No Hit |
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