ADASTRA v1.6.10
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rs2546433
chr5:181152244
C
>
T
Sequence
gctgcacagcccatgtttagtaaa[C/T]gcagaaccaagattgacaaagagt
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
2.21
-2.77
3.8·10
-6
1.00
2.00
n/a
No Hit
ANDR_HUMAN
2.01
-0.56
3.6·10
-5
1.00
2.12
n/a
No Hit
Items per page:
5
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Motif analysis
No data available
Genetic associations
EMBL-EBI
thyroid stimulating hormone levels
GRASP
neuroblastoma (brain cancer)
,
total cholesterol change with statins
GTEx eQTL
Artery_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)