rs2547325 chr19:51378859 C>T
- Sequence
gtaaatctcatggcagttagcaac[C/T]atttattttctttttctttttctt
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.07 | 1.42 | 1.66 | 4.83 | Concordant |
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Motif analysis
