rs2553234 chr15:60682924 C>T
- Sequence
aacctaaaatacacatacaccctg[C/T]gcccaaagtgaacacggtggatga
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma) liver
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.61 | 2.42 | 1.75 | n/a | No Hit | |||
| FOXA1_HUMAN | -1.42 | 1.86 | 1.50 | n/a | No Hit |
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