rs2555643 chr4:174538147 G>C
- Sequence
tttttaaaggaaaacataaagttt[G/C]gcaaccctatattgactccaccat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPA_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | n/a | 3.33 | 1.50 | 0.03 | Weak Concordant | |||
| FOXA2_HUMAN | -2.55 | 2.17 | 1.33 | n/a | No Hit |
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Motif analysis
