ADASTRA v1.6.10
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rs256439
chr5:80070257
T
>
C
Sequence
agaggcccttgtcagccaccagct[T/C]cctgccaggctcagcttcccaggc
ASB in cell types
ICN12 (primary pre-B acute lymphomablastic leukemia)
ASB for transcription factors
PBX1_HUMAN
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX1_HUMAN
1.32
-1.59
0.03
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
acute lung injury following major trauma
,
ldl cholesterol
,
prop taste detection threshold
,
rheumatoid arthritis
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Heart_Atrial_Appendage
,
Lung
,
Ovary
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)