rs2573618 chr15:99926345 G>C
- Sequence
cgcgttgaacgccgaggtgcacgc[G/C]caggtactggctaagtgcgcgcca
- ASB in cell types
- keratinocytes foreskin keratinocyte HCT-116 (colon carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | -3.29 | 2.43 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 1.24 | -0.26 | 1.11 | n/a | No Hit |
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