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rs2577383 chr10:116207266 A>G

Sequence
gctggagaaacactgaggtttcct[A/G]atcacctgtcaccaatctgagatc
ASB in cell types
liver
ASB for transcription factors
RXRA_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RXRA_HUMAN 1.74 -1.53 0.031.00 1.33 n/a No Hit
HNF4A_HUMAN 1.58 -1.20 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol obesity with early age of onset (age >2)
GTEx eQTL Brain_Putamen_basal_ganglia

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