rs257740 chr5:15791476 G>A
- Sequence
gaaatattacatatttcatgcttc[G/A]ggtgccacctagggtccagaaatg
- ASB in cell types
- SK-N-SH (neuroblastoma) NB69 (neuroblastoma) epithelial cell of prostate heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.94 | 0.51 | 1.66 | -1.97 | Weak Concordant | |||
| RAD21_HUMAN | 2.33 | -0.13 | 1.93 | n/a | n/a |
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Motif analysis
