ADASTRA v1.6.10
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rs25781
chr5:157220043
A
>
G
Sequence
gttctcttgtctgagccacttgaa[A/G]tcatttctctcctcaccttcttgt
ASB in cell types
GM12878 (female B-cells)
Th1-cells
ASB for transcription factors
MYB_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MYB_HUMAN
2.48
n/a
9.2·10
-4
1.00
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
ldl cholesterol
,
obesity with early age of onset (age >2)
,
paternal transmission distortion
,
transmission distortion
GTEx eQTL
Esophagus_Muscularis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)