rs25782 chr5:53109651 G>A
- Sequence
gctgggtatgtggagggaaagggc[G/A]ggagagacacgtcgaggagggctc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN HDAC1_HUMAN IKZF1_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | -1.14 | 2.21 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.61 | 1.69 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | n/a | 1.92 | 2.00 | n/a | No Hit | |||
| SPT5H_HUMAN | n/a | 2.48 | 2.00 | n/a | n/a | |||
| MTA3_HUMAN | -2.17 | 2.25 | 2.00 | n/a | n/a |
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