rs2578383 chr5:154016360 T>G
- Sequence
aagggaaagaatctcaagctgtga[T/G]acagaagcaccaggtaacctataa
- ASB in cell types
- H1 (embryonic stem cells)
- ASB for transcription factors
- GATA6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA6_HUMAN | 1.60 | -0.01 | 1.42 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Frontal_Cortex_BA9, Heart_Atrial_Appendage, Muscle_Skeletal, Testis, Whole_Blood