rs258908 chr5:16436565 A>G
- Sequence
gaccacccaagggctgaggagtgc[A/G]ggcgcacggcacgggactggcagg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- WT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| WT1_HUMAN | 1.80 | n/a | 1.00 | 0.65 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Substantia_nigra, Pancreas, Pituitary, Prostate, Testis