ADASTRA v1.6.10
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rs260437
chr19:58228378
C
>
G
Sequence
tcgcctccagttagcgtgcttcca[C/G]cttccactcggaatgctccaagca
ASB in cell types
HEK293 (embryonic kidney)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.63
0.02
4.3·10
-4
1.00
1.78
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Brain_Cerebellum
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale