rs260509 chr1:2255546 G>A
- Sequence
ctgacctcatttcctgtctgtgcc[G/A]ctctgtcctgacctcattttctgt
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- GABPA_HUMAN ANDR_HUMAN CREB1_HUMAN CREM_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.32 | -0.42 | 1.39 | n/a | No Hit | |||
| ANDR_HUMAN | 0.80 | 0.20 | 1.91 | n/a | No Hit | |||
| CREB1_HUMAN | 1.60 | -0.76 | 1.83 | n/a | No Hit | |||
| CREM_HUMAN | 1.95 | -2.32 | 1.50 | n/a | No Hit | |||
| EP300_HUMAN | 1.47 | -0.95 | 1.75 | n/a | n/a |
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