rs2605097 chr1:219468767 C>A
- Sequence
agttatgttataaagttacacttt[C/A]taggcagttttactggtcttatag
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.38 | 1.41 | 1.71 | n/a | No Hit | |||
| ANDR_HUMAN | 0.15 | 1.30 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, bipolar disorder, cystatin c in serum, fasting insulin, hdl cholesterol, height, homa-b, homa-ir, rheumatoid arthritis, salmonella-induced pyroptosis, serum creatinine, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Kidney_Cortex, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg