ADASTRA v1.6.10
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rs262661
chr1:2155206
T
>
C
Sequence
tggtggtgatgaagatgttgatga[T/C]ggcggtgatgatggtgatggcgat
ASB in cell types
HEK293 (embryonic kidney)
MCF7 (Invasive ductal breast carcinoma)
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
-0.10
1.06
1.00
3.5·10
-44
1.98
MCF7 (Invasive ductal breast carcinoma)
0.75
-0.43
6.5·10
-4
1.00
2.03
K562 (myelogenous leukemia)
0.51
0.59
0.44
6.6·10
-4
1.34
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Motif analysis
No data available
Genetic associations
GRASP
chronic kidney disease
,
height
,
mitral annular calcium
,
serum creatinine
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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