rs263096 chr11:35950200 G>A
- Sequence
agtgtaatctcggaggcatttcta[G/A]acaggagttgtactgatggatctt
- ASB in cell types
- VCaP (prostate carcinoma) breast tumor tissue MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.34 | 1.35 | 1.83 | n/a | No Hit | |||
| ESR1_HUMAN | 0.68 | 0.44 | 1.77 | n/a | No Hit | |||
| ANDR_HUMAN | 0.97 | 0.98 | 2.05 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, mitral annular calcium, parkinsons disease, sporadic creutzfeldt-jakob disease