rs263438 chr1:86704810 T>G
- Sequence
tccctccacctaccacgtctgccc[T/G]cgccgctctagccctgcgccccag
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) CD14+ monocytes
- ASB for transcription factors
- MNT_HUMAN VEZF1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 1.83 | 0.05 | 1.77 | n/a | n/a | |||
| VEZF1_HUMAN | 2.05 | -2.67 | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | 0.98 | -3.32 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg