rs2668939 chr1:41740802 C>T
- Sequence
tcatgggtaccagccctggctcta[C/T]cattcatccacagatgtgtgaccc
- ASB in cell types
- GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells) | 0.48 | 0.29 | 1.31 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, chronic kidney disease, fasting insulin, homa-ir, hypertension (early onset hypertension), resistance to kuru in aged women despite likely exposure, salmonella-induced pyroptosis