rs2679581 chr3:8803961 A>G
- Sequence
aaaggactgttgtccagaatacac[A/G]aagaactcttaaaagtgaacaata
- ASB in cell types
- VCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.92 | -0.77 | 1.56 | -4.78 | Concordant | |||
| ANDR_HUMAN | 0.83 | 0.02 | 1.48 | n/a | No Hit |
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Motif analysis
