rs268120 chr2:65377780 A>G
- Sequence
tccctaggtaactgtcaaagcggc[A/G]gtcctcagcagagaccaaagagga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- RFX1_HUMAN IKZF1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | 1.34 | -1.70 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.24 | -0.77 | 1.33 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.97 | 0.01 | 1.48 | n/a | No Hit |
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